Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm17192-201ENSMUST00000169031 511 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Gm7504-201ENSMUST00000201449 424 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Gm22846-201ENSMUST00000157706 270 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Gm23105-201ENSMUST00000083719 134 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.84□□□□□ -0.67
Cacna1aP97445 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cacna1aP97445 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.84□□□□□ -0.67
Cacna1aP97445 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm8459-201ENSMUST00000162504 760 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.83□□□□□ -0.68
Cacna1aP97445 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Cacna1aP97445 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.83□□□□□ -0.68
Cacna1aP97445 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.83□□□□□ -0.68
Cacna1aP97445 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cacna1aP97445 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms