Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps45P97390 Gm11509-201ENSMUST00000117358 325 ntBASIC12.14□□□□□ -0.47
Vps45P97390 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps45P97390 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps45P97390 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.14□□□□□ -0.47
Vps45P97390 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps45P97390 Gm4482-201ENSMUST00000200876 742 ntBASIC12.14□□□□□ -0.47
Vps45P97390 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps45P97390 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps45P97390 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps45P97390 Gm6905-201ENSMUST00000205729 511 ntBASIC12.14□□□□□ -0.47
Vps45P97390 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.14□□□□□ -0.47
Vps45P97390 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vps45P97390 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps45P97390 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.14□□□□□ -0.47
Vps45P97390 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps45P97390 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Gm7851-201ENSMUST00000117574 323 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps45P97390 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.13□□□□□ -0.47
Vps45P97390 Gm25881-201ENSMUST00000157783 103 ntBASIC12.13□□□□□ -0.47
Vps45P97390 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps45P97390 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Gm38210-201ENSMUST00000191944 809 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Gm19287-201ENSMUST00000203190 358 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Vps45P97390 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps45P97390 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Gm270-201ENSMUST00000223010 976 ntBASIC12.13□□□□□ -0.47
Vps45P97390 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.13□□□□□ -0.47
Vps45P97390 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.13□□□□□ -0.47
Vps45P97390 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Gm5705-201ENSMUST00000066241 711 ntBASIC12.13□□□□□ -0.47
Vps45P97390 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps45P97390 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Vps45P97390 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps45P97390 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps45P97390 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Vps45P97390 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vps45P97390 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps45P97390 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps45P97390 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms