Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SgcdP82347 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
SgcdP82347 Gm11637-201ENSMUST00000120601 592 ntBASIC10.91□□□□□ -0.66
SgcdP82347 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcdP82347 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.91□□□□□ -0.66
SgcdP82347 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SgcdP82347 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SgcdP82347 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.91□□□□□ -0.66
SgcdP82347 Gm6621-201ENSMUST00000193251 772 ntBASIC10.91□□□□□ -0.66
SgcdP82347 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.91□□□□□ -0.66
SgcdP82347 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.91□□□□□ -0.66
SgcdP82347 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.91□□□□□ -0.66
SgcdP82347 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
SgcdP82347 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcdP82347 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcdP82347 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcdP82347 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 AC154352.1-201ENSMUST00000221477 2365 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.9□□□□□ -0.66
SgcdP82347 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SgcdP82347 Gm24255-201ENSMUST00000104481 128 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Gm4986-201ENSMUST00000119731 549 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Gm13786-201ENSMUST00000122371 333 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcdP82347 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcdP82347 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.9□□□□□ -0.66
SgcdP82347 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SgcdP82347 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcdP82347 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcdP82347 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SgcdP82347 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcdP82347 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.9□□□□□ -0.67
SgcdP82347 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SgcdP82347 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
SgcdP82347 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.9□□□□□ -0.67
SgcdP82347 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcdP82347 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
SgcdP82347 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.89□□□□□ -0.67
SgcdP82347 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcdP82347 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SgcdP82347 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SgcdP82347 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms