Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm14127-201ENSMUST00000117906 678 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm27516-201ENSMUST00000184237 98 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm38266-201ENSMUST00000194931 421 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.92□□□□□ -0.34
Hmgb1P63158 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hmgb1P63158 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC12.92□□□□□ -0.34
Hmgb1P63158 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm11439-201ENSMUST00000118598 409 ntBASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm45865-201ENSMUST00000211815 945 ntBASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm5705-201ENSMUST00000066241 711 ntBASIC12.91□□□□□ -0.34
Hmgb1P63158 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Hmgb1P63158 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgb1P63158 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hmgb1P63158 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms