Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gm14999-201ENSMUST00000121039 624 ntBASIC10.34□□□□□ -0.75
Sec61a1P61620 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gm15547-201ENSMUST00000122152 333 ntBASIC10.34□□□□□ -0.75
Sec61a1P61620 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.34□□□□□ -0.75
Sec61a1P61620 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.34□□□□□ -0.75
Sec61a1P61620 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a1P61620 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a1P61620 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Sec61a1P61620 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.33□□□□□ -0.76
Sec61a1P61620 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm27023-201ENSMUST00000182372 285 ntBASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm8712-201ENSMUST00000221090 701 ntBASIC10.33□□□□□ -0.76
Sec61a1P61620 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sec61a1P61620 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Rgr-203ENSMUST00000225070 4704 ntBASIC10.33□□□□□ -0.76
Sec61a1P61620 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a1P61620 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a1P61620 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a1P61620 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.33□□□□□ -0.76
Sec61a1P61620 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.33□□□□□ -0.76
Sec61a1P61620 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms