Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.42□□□□□ -0.74
Sf3b6P59708 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b6P59708 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b6P59708 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.41□□□□□ -0.74
Sf3b6P59708 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm13875-201ENSMUST00000120162 282 ntBASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b6P59708 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm28882-201ENSMUST00000185504 314 ntBASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 AC155266.1-201ENSMUST00000220762 904 ntBASIC10.41□□□□□ -0.74
Sf3b6P59708 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm7399-201ENSMUST00000032395 858 ntBASIC10.41□□□□□ -0.74
Sf3b6P59708 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sf3b6P59708 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b6P59708 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Mir1247-201ENSMUST00000116706 82 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm6023-201ENSMUST00000118217 606 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm23757-201ENSMUST00000158353 100 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm37436-201ENSMUST00000193842 1085 ntBASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.4□□□□□ -0.74
Sf3b6P59708 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sf3b6P59708 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.4□□□□□ -0.74
Sf3b6P59708 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.4□□□□□ -0.74
Sf3b6P59708 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms