Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 AC154639.1-201ENSMUST00000224393 2849 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 AC124397.2-201ENSMUST00000225575 2215 ntBASIC15.71■□□□□ 0.11
Nphp4P59240 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Nphp4P59240 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Nphp4P59240 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nphp4P59240 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC15.71■□□□□ 0.11
Nphp4P59240 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.71■□□□□ 0.11
Nphp4P59240 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nphp4P59240 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Gm25880-201ENSMUST00000104331 132 ntBASIC15.71■□□□□ 0.11
Nphp4P59240 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Nphp4P59240 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC15.71■□□□□ 0.11
Nphp4P59240 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nphp4P59240 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC15.71■□□□□ 0.11
Nphp4P59240 Gm9353-201ENSMUST00000200472 604 ntBASIC15.71■□□□□ 0.11
Nphp4P59240 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC15.71■□□□□ 0.11
Nphp4P59240 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.71■□□□□ 0.11
Nphp4P59240 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nphp4P59240 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Nphp4P59240 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nphp4P59240 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nphp4P59240 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC15.71■□□□□ 0.1
Nphp4P59240 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nphp4P59240 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nphp4P59240 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nphp4P59240 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nphp4P59240 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Gm6157-201ENSMUST00000199935 1897 ntBASIC15.7■□□□□ 0.1
Nphp4P59240 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Nphp4P59240 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC15.7■□□□□ 0.1
Nphp4P59240 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Gm28833-201ENSMUST00000189671 559 ntBASIC15.7■□□□□ 0.1
Nphp4P59240 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nphp4P59240 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nphp4P59240 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC15.7■□□□□ 0.1
Nphp4P59240 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC15.7■□□□□ 0.1
Nphp4P59240 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nphp4P59240 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Nphp4P59240 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Nphp4P59240 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Gm22379-201ENSMUST00000157480 131 ntBASIC15.69■□□□□ 0.1
Nphp4P59240 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nphp4P59240 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.69■□□□□ 0.1
Nphp4P59240 Id2-203ENSMUST00000222667 958 ntBASIC15.69■□□□□ 0.1
Nphp4P59240 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Gm18798-201ENSMUST00000187264 1700 ntBASIC15.69■□□□□ 0.1
Nphp4P59240 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC15.69■□□□□ 0.1
Nphp4P59240 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms