Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.46□□□□□ -0.25
Tpm2P58774 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.46□□□□□ -0.25
Tpm2P58774 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.46□□□□□ -0.25
Tpm2P58774 Gm16379-201ENSMUST00000161469 348 ntBASIC13.46□□□□□ -0.25
Tpm2P58774 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.46□□□□□ -0.25
Tpm2P58774 Gm8762-201ENSMUST00000193486 339 ntBASIC13.46□□□□□ -0.25
Tpm2P58774 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.46□□□□□ -0.25
Tpm2P58774 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.46□□□□□ -0.25
Tpm2P58774 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Gm12799-201ENSMUST00000118151 2560 ntBASIC13.46□□□□□ -0.26
Tpm2P58774 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm2P58774 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm2P58774 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm2P58774 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm2P58774 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm2P58774 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tpm2P58774 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tpm2P58774 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Tpm2P58774 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Gm24830-201ENSMUST00000102024 166 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.45□□□□□ -0.26
Tpm2P58774 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.45□□□□□ -0.26
Tpm2P58774 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.45□□□□□ -0.26
Tpm2P58774 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC13.45□□□□□ -0.26
Tpm2P58774 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Gm26232-201ENSMUST00000083360 166 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC13.45□□□□□ -0.26
Tpm2P58774 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Tpm2P58774 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Tpm2P58774 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tpm2P58774 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.45□□□□□ -0.26
Tpm2P58774 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tpm2P58774 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Tpm2P58774 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Tpm2P58774 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Tpm2P58774 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Rims2-204ENSMUST00000226410 3685 ntBASIC13.44□□□□□ -0.26
Tpm2P58774 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tpm2P58774 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Gm23912-201ENSMUST00000104687 87 ntBASIC13.44□□□□□ -0.26
Tpm2P58774 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.44□□□□□ -0.26
Tpm2P58774 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.44□□□□□ -0.26
Tpm2P58774 Gm7653-201ENSMUST00000214567 508 ntBASIC13.44□□□□□ -0.26
Tpm2P58774 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.44□□□□□ -0.26
Tpm2P58774 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.44□□□□□ -0.26
Tpm2P58774 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tpm2P58774 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.44□□□□□ -0.26
Tpm2P58774 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tpm2P58774 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tpm2P58774 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms