Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.04□□□□□ -0.32
Tpm1P58771 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.04□□□□□ -0.32
Tpm1P58771 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.04□□□□□ -0.32
Tpm1P58771 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm9996-201ENSMUST00000070359 913 ntBASIC13.04□□□□□ -0.32
Tpm1P58771 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tpm1P58771 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.04□□□□□ -0.32
Tpm1P58771 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.04□□□□□ -0.32
Tpm1P58771 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tpm1P58771 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.03□□□□□ -0.32
Tpm1P58771 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.03□□□□□ -0.32
Tpm1P58771 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Tpm1P58771 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.03□□□□□ -0.32
Tpm1P58771 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Tpm1P58771 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.03□□□□□ -0.32
Tpm1P58771 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.03□□□□□ -0.32
Tpm1P58771 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.03□□□□□ -0.32
Tpm1P58771 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.03□□□□□ -0.32
Tpm1P58771 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.03□□□□□ -0.32
Tpm1P58771 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.03□□□□□ -0.32
Tpm1P58771 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Tpm1P58771 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Tpm1P58771 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tpm1P58771 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.02□□□□□ -0.32
Tpm1P58771 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Tpm1P58771 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.02□□□□□ -0.32
Tpm1P58771 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Tpm1P58771 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Tpm1P58771 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.02□□□□□ -0.33
Tpm1P58771 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.02□□□□□ -0.33
Tpm1P58771 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.02□□□□□ -0.33
Tpm1P58771 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Tpm1P58771 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Tpm1P58771 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms