Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Erich3-203ENSMUST00000189969 3460 ntBASIC13.19□□□□□ -0.3
Rrp1P56183 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.19□□□□□ -0.3
Rrp1P56183 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rrp1P56183 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.18□□□□□ -0.3
Rrp1P56183 Gm14723-201ENSMUST00000118686 215 ntBASIC13.18□□□□□ -0.3
Rrp1P56183 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.18□□□□□ -0.3
Rrp1P56183 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.18□□□□□ -0.3
Rrp1P56183 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.18□□□□□ -0.3
Rrp1P56183 Gm30285-201ENSMUST00000214614 422 ntBASIC13.18□□□□□ -0.3
Rrp1P56183 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.18□□□□□ -0.3
Rrp1P56183 Gm18065-201ENSMUST00000221395 526 ntBASIC13.18□□□□□ -0.3
Rrp1P56183 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rrp1P56183 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.18□□□□□ -0.3
Rrp1P56183 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rrp1P56183 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.17□□□□□ -0.3
Rrp1P56183 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rrp1P56183 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.17□□□□□ -0.3
Rrp1P56183 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rrp1P56183 Gm6963-201ENSMUST00000147879 379 ntBASIC13.17□□□□□ -0.3
Rrp1P56183 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Gm6334-201ENSMUST00000207083 228 ntBASIC13.17□□□□□ -0.3
Rrp1P56183 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.17□□□□□ -0.3
Rrp1P56183 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rrp1P56183 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rrp1P56183 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rrp1P56183 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.16□□□□□ -0.3
Rrp1P56183 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.16□□□□□ -0.3
Rrp1P56183 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rrp1P56183 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rrp1P56183 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp1P56183 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rrp1P56183 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms