Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ddx6P54823 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.9□□□□□ -0.5
Ddx6P54823 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ddx6P54823 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.9□□□□□ -0.5
Ddx6P54823 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.9□□□□□ -0.5
Ddx6P54823 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.9□□□□□ -0.5
Ddx6P54823 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.9□□□□□ -0.5
Ddx6P54823 Gm37028-201ENSMUST00000194276 107 ntBASIC11.9□□□□□ -0.5
Ddx6P54823 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.9□□□□□ -0.5
Ddx6P54823 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ddx6P54823 Gm19091-201ENSMUST00000208120 978 ntBASIC11.9□□□□□ -0.5
Ddx6P54823 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ddx6P54823 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.9□□□□□ -0.5
Ddx6P54823 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.9□□□□□ -0.5
Ddx6P54823 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ddx6P54823 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.9□□□□□ -0.5
Ddx6P54823 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ddx6P54823 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ddx6P54823 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ddx6P54823 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ddx6P54823 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.9□□□□□ -0.51
Ddx6P54823 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.9□□□□□ -0.51
Ddx6P54823 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.89□□□□□ -0.51
Ddx6P54823 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.89□□□□□ -0.51
Ddx6P54823 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.89□□□□□ -0.51
Ddx6P54823 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.89□□□□□ -0.51
Ddx6P54823 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.89□□□□□ -0.51
Ddx6P54823 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ddx6P54823 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
Ddx6P54823 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ddx6P54823 Gm14395-201ENSMUST00000120494 563 ntBASIC11.89□□□□□ -0.51
Ddx6P54823 Gm13937-201ENSMUST00000121000 988 ntBASIC11.89□□□□□ -0.51
Ddx6P54823 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.89□□□□□ -0.51
Ddx6P54823 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.89□□□□□ -0.51
Ddx6P54823 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.89□□□□□ -0.51
Ddx6P54823 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.89□□□□□ -0.51
Ddx6P54823 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Gm37826-201ENSMUST00000195329 322 ntBASIC11.89□□□□□ -0.51
Ddx6P54823 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.89□□□□□ -0.51
Ddx6P54823 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms