Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh6P54276 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msh6P54276 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Msh6P54276 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Msh6P54276 Gm11979-201ENSMUST00000119629 743 ntBASIC14.77□□□□□ -0.04
Msh6P54276 Gm12791-201ENSMUST00000120788 655 ntBASIC14.77□□□□□ -0.04
Msh6P54276 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.77□□□□□ -0.04
Msh6P54276 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.77□□□□□ -0.04
Msh6P54276 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.77□□□□□ -0.04
Msh6P54276 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Msh6P54276 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Msh6P54276 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.77□□□□□ -0.04
Msh6P54276 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.77□□□□□ -0.04
Msh6P54276 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh6P54276 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh6P54276 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Msh6P54276 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.77□□□□□ -0.05
Msh6P54276 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Msh6P54276 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.77□□□□□ -0.05
Msh6P54276 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Msh6P54276 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Msh6P54276 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Msh6P54276 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Gm14274-201ENSMUST00000117182 615 ntBASIC14.76□□□□□ -0.05
Msh6P54276 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Gm22146-201ENSMUST00000157397 288 ntBASIC14.76□□□□□ -0.05
Msh6P54276 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Gm18065-201ENSMUST00000221395 526 ntBASIC14.76□□□□□ -0.05
Msh6P54276 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.76□□□□□ -0.05
Msh6P54276 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Msh6P54276 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.76□□□□□ -0.05
Msh6P54276 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.76□□□□□ -0.05
Msh6P54276 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Msh6P54276 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Msh6P54276 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.75□□□□□ -0.05
Msh6P54276 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Msh6P54276 Gm14270-201ENSMUST00000118388 846 ntBASIC14.75□□□□□ -0.05
Msh6P54276 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Gm12274-201ENSMUST00000120062 385 ntBASIC14.75□□□□□ -0.05
Msh6P54276 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.75□□□□□ -0.05
Msh6P54276 Gm25554-201ENSMUST00000158075 113 ntBASIC14.75□□□□□ -0.05
Msh6P54276 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Gm18776-201ENSMUST00000188833 654 ntBASIC14.75□□□□□ -0.05
Msh6P54276 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Gm8197-202ENSMUST00000193422 934 ntBASIC14.75□□□□□ -0.05
Msh6P54276 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.75□□□□□ -0.05
Msh6P54276 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Msh6P54276 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.75□□□□□ -0.05
Msh6P54276 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.75□□□□□ -0.05
Msh6P54276 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh6P54276 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 218 ms