Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox1P53783 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox1P53783 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Sox1P53783 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox1P53783 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox1P53783 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox1P53783 Gm23439-201ENSMUST00000104292 132 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Gm14395-201ENSMUST00000120494 563 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Gm15136-201ENSMUST00000120552 533 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.99□□□□□ -0.49
Sox1P53783 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox1P53783 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Gm7765-201ENSMUST00000182585 974 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Gm8226-201ENSMUST00000190511 798 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox1P53783 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Gm6518-201ENSMUST00000208450 342 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox1P53783 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox1P53783 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.99□□□□□ -0.49
Sox1P53783 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Capsl-202ENSMUST00000226688 739 ntBASIC11.99□□□□□ -0.49
Sox1P53783 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.99□□□□□ -0.49
Sox1P53783 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Gm4978-201ENSMUST00000071565 801 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.99□□□□□ -0.49
Sox1P53783 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.99□□□□□ -0.49
Sox1P53783 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox1P53783 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Sox1P53783 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox1P53783 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox1P53783 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox1P53783 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox1P53783 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.98□□□□□ -0.49
Sox1P53783 Gm15626-201ENSMUST00000117478 868 ntBASIC11.98□□□□□ -0.49
Sox1P53783 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.98□□□□□ -0.49
Sox1P53783 Gm11736-201ENSMUST00000121468 505 ntBASIC11.98□□□□□ -0.49
Sox1P53783 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox1P53783 Gm29543-201ENSMUST00000188138 967 ntBASIC11.98□□□□□ -0.49
Sox1P53783 Gm38233-201ENSMUST00000194259 807 ntBASIC11.98□□□□□ -0.49
Sox1P53783 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.98□□□□□ -0.49
Sox1P53783 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.98□□□□□ -0.49
Sox1P53783 Gm5468-202ENSMUST00000227851 682 ntBASIC11.98□□□□□ -0.49
Sox1P53783 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox1P53783 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox1P53783 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox1P53783 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox1P53783 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Sox1P53783 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox1P53783 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms