Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.38□□□□□ -0.43
Shmt1P50431 Gm3150-201ENSMUST00000166418 204 ntBASIC12.38□□□□□ -0.43
Shmt1P50431 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.38□□□□□ -0.43
Shmt1P50431 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shmt1P50431 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Gm29499-201ENSMUST00000189151 486 ntBASIC12.38□□□□□ -0.43
Shmt1P50431 Gm28329-201ENSMUST00000191208 689 ntBASIC12.38□□□□□ -0.43
Shmt1P50431 Gm29171-201ENSMUST00000191397 486 ntBASIC12.38□□□□□ -0.43
Shmt1P50431 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.38□□□□□ -0.43
Shmt1P50431 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.38□□□□□ -0.43
Shmt1P50431 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shmt1P50431 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shmt1P50431 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shmt1P50431 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.38□□□□□ -0.43
Shmt1P50431 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Shmt1P50431 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shmt1P50431 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.38□□□□□ -0.43
Shmt1P50431 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.38□□□□□ -0.43
Shmt1P50431 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.38□□□□□ -0.43
Shmt1P50431 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt1P50431 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.37□□□□□ -0.43
Shmt1P50431 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.37□□□□□ -0.43
Shmt1P50431 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.37□□□□□ -0.43
Shmt1P50431 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Gm4726-201ENSMUST00000135604 736 ntBASIC12.37□□□□□ -0.43
Shmt1P50431 Gm6019-201ENSMUST00000148369 736 ntBASIC12.37□□□□□ -0.43
Shmt1P50431 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Mir8115-201ENSMUST00000184992 119 ntBASIC12.37□□□□□ -0.43
Shmt1P50431 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.37□□□□□ -0.43
Shmt1P50431 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.37□□□□□ -0.43
Shmt1P50431 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Shmt1P50431 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.37□□□□□ -0.43
Shmt1P50431 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt1P50431 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shmt1P50431 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Shmt1P50431 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Shmt1P50431 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.36□□□□□ -0.43
Shmt1P50431 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.36□□□□□ -0.43
Shmt1P50431 Gm12407-201ENSMUST00000180219 324 ntBASIC12.36□□□□□ -0.43
Shmt1P50431 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.36□□□□□ -0.43
Shmt1P50431 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.36□□□□□ -0.43
Shmt1P50431 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms