Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nkx2-1P50220 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.69□□□□□ -0.86
Nkx2-1P50220 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Gm14441-201ENSMUST00000121960 540 ntBASIC9.69□□□□□ -0.86
Nkx2-1P50220 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Gm42937-201ENSMUST00000197360 752 ntBASIC9.69□□□□□ -0.86
Nkx2-1P50220 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.69□□□□□ -0.86
Nkx2-1P50220 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.69□□□□□ -0.86
Nkx2-1P50220 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.69□□□□□ -0.86
Nkx2-1P50220 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nkx2-1P50220 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.68□□□□□ -0.86
Nkx2-1P50220 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.68□□□□□ -0.86
Nkx2-1P50220 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm14999-201ENSMUST00000121039 624 ntBASIC9.68□□□□□ -0.86
Nkx2-1P50220 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm27731-201ENSMUST00000185192 107 ntBASIC9.68□□□□□ -0.86
Nkx2-1P50220 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms