Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
GdnfP48540 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
GdnfP48540 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
GdnfP48540 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.32□□□□□ -0.76
GdnfP48540 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.32□□□□□ -0.76
GdnfP48540 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Gm12314-201ENSMUST00000118104 538 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.32□□□□□ -0.76
GdnfP48540 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.32□□□□□ -0.76
GdnfP48540 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.32□□□□□ -0.76
GdnfP48540 Gm18304-201ENSMUST00000189162 546 ntBASIC10.32□□□□□ -0.76
GdnfP48540 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.32□□□□□ -0.76
GdnfP48540 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.32□□□□□ -0.76
GdnfP48540 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.32□□□□□ -0.76
GdnfP48540 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Gm6334-201ENSMUST00000207083 228 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.32□□□□□ -0.76
GdnfP48540 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Gm7046-201ENSMUST00000221351 977 ntBASIC10.32□□□□□ -0.76
GdnfP48540 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
GdnfP48540 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Gm8420-201ENSMUST00000097103 598 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.32□□□□□ -0.76
GdnfP48540 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.32□□□□□ -0.76
GdnfP48540 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
GdnfP48540 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.32□□□□□ -0.76
GdnfP48540 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
GdnfP48540 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
GdnfP48540 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
GdnfP48540 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.31□□□□□ -0.76
GdnfP48540 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
GdnfP48540 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
GdnfP48540 Gm25214-201ENSMUST00000104573 129 ntBASIC10.31□□□□□ -0.76
GdnfP48540 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Gm12058-201ENSMUST00000118614 437 ntBASIC10.31□□□□□ -0.76
GdnfP48540 Gm12036-201ENSMUST00000120008 530 ntBASIC10.31□□□□□ -0.76
GdnfP48540 Gm14999-201ENSMUST00000121039 624 ntBASIC10.31□□□□□ -0.76
GdnfP48540 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
GdnfP48540 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
GdnfP48540 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
GdnfP48540 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
GdnfP48540 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
GdnfP48540 Gm21147-201ENSMUST00000186046 913 ntBASIC10.31□□□□□ -0.76
GdnfP48540 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
GdnfP48540 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
GdnfP48540 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms