Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.59□□□□□ -0.71
Rfx3P48381 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.59□□□□□ -0.71
Rfx3P48381 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.59□□□□□ -0.71
Rfx3P48381 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.58□□□□□ -0.72
Rfx3P48381 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.58□□□□□ -0.72
Rfx3P48381 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm14723-201ENSMUST00000118686 215 ntBASIC10.58□□□□□ -0.72
Rfx3P48381 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm7722-201ENSMUST00000120646 741 ntBASIC10.58□□□□□ -0.72
Rfx3P48381 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rfx3P48381 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm5070-201ENSMUST00000177599 862 ntBASIC10.58□□□□□ -0.72
Rfx3P48381 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm38241-201ENSMUST00000192641 898 ntBASIC10.58□□□□□ -0.72
Rfx3P48381 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rfx3P48381 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rfx3P48381 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Rfx3P48381 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.58□□□□□ -0.72
Rfx3P48381 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Rfx3P48381 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.58□□□□□ -0.72
Rfx3P48381 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Rfx3P48381 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.57□□□□□ -0.72
Rfx3P48381 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.57□□□□□ -0.72
Rfx3P48381 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Rfx3P48381 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Rfx3P48381 Gm14109-201ENSMUST00000118814 309 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms