Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps4bP46467 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.89□□□□□ -0.51
Vps4bP46467 Gm37986-201ENSMUST00000193285 383 ntBASIC11.89□□□□□ -0.51
Vps4bP46467 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Gm19208-201ENSMUST00000213861 912 ntBASIC11.89□□□□□ -0.51
Vps4bP46467 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.89□□□□□ -0.51
Vps4bP46467 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps4bP46467 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vps4bP46467 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.89□□□□□ -0.51
Vps4bP46467 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Vps4bP46467 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps4bP46467 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps4bP46467 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Vps4bP46467 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.88□□□□□ -0.51
Vps4bP46467 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.88□□□□□ -0.51
Vps4bP46467 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Vps4bP46467 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Gm11439-201ENSMUST00000118598 409 ntBASIC11.88□□□□□ -0.51
Vps4bP46467 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.88□□□□□ -0.51
Vps4bP46467 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.88□□□□□ -0.51
Vps4bP46467 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.88□□□□□ -0.51
Vps4bP46467 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.88□□□□□ -0.51
Vps4bP46467 Gm43962-201ENSMUST00000203898 190 ntBASIC11.88□□□□□ -0.51
Vps4bP46467 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Vps4bP46467 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vps4bP46467 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps4bP46467 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.87□□□□□ -0.51
Vps4bP46467 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vps4bP46467 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vps4bP46467 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps4bP46467 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Gm26286-201ENSMUST00000104166 134 ntBASIC11.87□□□□□ -0.51
Vps4bP46467 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Gm15004-201ENSMUST00000119192 630 ntBASIC11.87□□□□□ -0.51
Vps4bP46467 Gm13461-201ENSMUST00000120980 662 ntBASIC11.87□□□□□ -0.51
Vps4bP46467 Gm14017-201ENSMUST00000121934 386 ntBASIC11.87□□□□□ -0.51
Vps4bP46467 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.87□□□□□ -0.51
Vps4bP46467 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps4bP46467 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms