Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sox18P43680 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sox18P43680 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox18P43680 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox18P43680 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Sox18P43680 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox18P43680 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Gm15161-201ENSMUST00000117340 387 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Gm14833-201ENSMUST00000118345 1027 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Gm7350-201ENSMUST00000120964 636 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Sox18P43680 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC11.48□□□□□ -0.57
Sox18P43680 Gm29499-201ENSMUST00000189151 486 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Gm28329-201ENSMUST00000191208 689 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Gm29171-201ENSMUST00000191397 486 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox18P43680 Gm42619-201ENSMUST00000197564 1136 ntBASIC11.48□□□□□ -0.57
Sox18P43680 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.48□□□□□ -0.57
Sox18P43680 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.48□□□□□ -0.57
Sox18P43680 AC174797.4-201ENSMUST00000225510 347 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox18P43680 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox18P43680 Gm5805-201ENSMUST00000072779 456 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sox18P43680 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.48□□□□□ -0.57
Sox18P43680 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sox18P43680 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Sox18P43680 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sox18P43680 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sox18P43680 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Gm25076-201ENSMUST00000104098 132 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Gm8731-201ENSMUST00000118088 412 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Gm11836-201ENSMUST00000121022 441 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sox18P43680 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sox18P43680 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sox18P43680 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.47□□□□□ -0.57
Sox18P43680 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sox18P43680 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox18P43680 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.47□□□□□ -0.57
Sox18P43680 CT025526.1-201ENSMUST00000217327 267 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Gm9797-202ENSMUST00000218003 294 ntBASIC11.47□□□□□ -0.57
Sox18P43680 Gm23680-201ENSMUST00000083162 164 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms