Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx2P43241 Gm15549-201ENSMUST00000121595 622 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdx2P43241 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Gm24248-201ENSMUST00000157321 322 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdx2P43241 Gm19587-201ENSMUST00000191395 545 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 Gm44647-201ENSMUST00000207402 428 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdx2P43241 Gm18204-201ENSMUST00000209835 793 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Mt1-202ENSMUST00000211807 1085 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx2P43241 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx2P43241 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.12□□□□□ -0.63
Cdx2P43241 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.12□□□□□ -0.63
Cdx2P43241 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx2P43241 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdx2P43241 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdx2P43241 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdx2P43241 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdx2P43241 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.11□□□□□ -0.63
Cdx2P43241 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdx2P43241 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdx2P43241 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm15329-201ENSMUST00000121408 155 ntBASIC11.11□□□□□ -0.63
Cdx2P43241 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm25545-201ENSMUST00000122673 323 ntBASIC11.11□□□□□ -0.63
Cdx2P43241 Gm25554-201ENSMUST00000158075 113 ntBASIC11.11□□□□□ -0.63
Cdx2P43241 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm45500-201ENSMUST00000211676 803 ntBASIC11.11□□□□□ -0.63
Cdx2P43241 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdx2P43241 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Cdx2P43241 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdx2P43241 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdx2P43241 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdx2P43241 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.11□□□□□ -0.63
Cdx2P43241 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdx2P43241 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdx2P43241 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.1□□□□□ -0.63
Cdx2P43241 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdx2P43241 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms