Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Rprl1-202ENSMUST00000198476 238 ntBASIC11.34□□□□□ -0.59
TfamP40630 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.34□□□□□ -0.59
TfamP40630 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.34□□□□□ -0.59
TfamP40630 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.34□□□□□ -0.59
TfamP40630 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.34□□□□□ -0.59
TfamP40630 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.34□□□□□ -0.59
TfamP40630 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
TfamP40630 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.34□□□□□ -0.59
TfamP40630 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
TfamP40630 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.34□□□□□ -0.59
TfamP40630 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.34□□□□□ -0.59
TfamP40630 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TfamP40630 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
TfamP40630 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TfamP40630 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
TfamP40630 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.33□□□□□ -0.6
TfamP40630 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.33□□□□□ -0.6
TfamP40630 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
TfamP40630 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.33□□□□□ -0.6
TfamP40630 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TfamP40630 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Gm11960-201ENSMUST00000122068 925 ntBASIC11.33□□□□□ -0.6
TfamP40630 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.33□□□□□ -0.6
TfamP40630 Mir8109-201ENSMUST00000184375 117 ntBASIC11.33□□□□□ -0.6
TfamP40630 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
TfamP40630 Gm32999-201ENSMUST00000192693 562 ntBASIC11.33□□□□□ -0.6
TfamP40630 Gm38314-201ENSMUST00000195709 625 ntBASIC11.33□□□□□ -0.6
TfamP40630 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.33□□□□□ -0.6
TfamP40630 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TfamP40630 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TfamP40630 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TfamP40630 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TfamP40630 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TfamP40630 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.33□□□□□ -0.6
TfamP40630 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.32□□□□□ -0.6
TfamP40630 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.32□□□□□ -0.6
TfamP40630 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.32□□□□□ -0.6
TfamP40630 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.32□□□□□ -0.6
TfamP40630 Gm38266-201ENSMUST00000194931 421 ntBASIC11.32□□□□□ -0.6
TfamP40630 Gm43002-201ENSMUST00000200310 155 ntBASIC11.32□□□□□ -0.6
TfamP40630 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.32□□□□□ -0.6
TfamP40630 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TfamP40630 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms