Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Chd1P40201 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chd1P40201 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chd1P40201 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Snord17-201ENSMUST00000104526 238 ntBASIC17.17■□□□□ 0.34
Chd1P40201 Gm15476-201ENSMUST00000118247 1191 ntBASIC17.17■□□□□ 0.34
Chd1P40201 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC17.17■□□□□ 0.34
Chd1P40201 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Gm25694-201ENSMUST00000175448 282 ntBASIC17.17■□□□□ 0.34
Chd1P40201 Gm6686-201ENSMUST00000178455 258 ntBASIC17.17■□□□□ 0.34
Chd1P40201 Gm42867-201ENSMUST00000202995 469 ntBASIC17.17■□□□□ 0.34
Chd1P40201 Gm8796-201ENSMUST00000219122 936 ntBASIC17.17■□□□□ 0.34
Chd1P40201 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 AC154197.1-201ENSMUST00000225136 1382 ntBASIC17.17■□□□□ 0.34
Chd1P40201 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd1P40201 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd1P40201 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd1P40201 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd1P40201 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Gm16210-201ENSMUST00000122161 610 ntBASIC17.16■□□□□ 0.34
Chd1P40201 Gm8824-201ENSMUST00000182962 990 ntBASIC17.16■□□□□ 0.34
Chd1P40201 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC17.16■□□□□ 0.34
Chd1P40201 AC154433.1-201ENSMUST00000224401 1183 ntBASIC17.16■□□□□ 0.34
Chd1P40201 CT009550.1-201ENSMUST00000225750 864 ntBASIC17.16■□□□□ 0.34
Chd1P40201 AC123061.1-201ENSMUST00000228021 999 ntBASIC17.16■□□□□ 0.34
Chd1P40201 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC17.16■□□□□ 0.34
Chd1P40201 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chd1P40201 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chd1P40201 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd1P40201 Gm16480-201ENSMUST00000120439 832 ntBASIC17.16■□□□□ 0.34
Chd1P40201 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd1P40201 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC17.16■□□□□ 0.34
Chd1P40201 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd1P40201 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Gm27833-201ENSMUST00000184285 124 ntBASIC17.16■□□□□ 0.34
Chd1P40201 CT571271.1-201ENSMUST00000227071 670 ntBASIC17.16■□□□□ 0.34
Chd1P40201 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd1P40201 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.15■□□□□ 0.34
Chd1P40201 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Gm10537-201ENSMUST00000192625 1698 ntBASIC17.15■□□□□ 0.34
Chd1P40201 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chd1P40201 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.15■□□□□ 0.34
Chd1P40201 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chd1P40201 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chd1P40201 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC17.15■□□□□ 0.34
Chd1P40201 AC090962.2-201ENSMUST00000225064 1801 ntBASIC17.15■□□□□ 0.34
Chd1P40201 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC17.15■□□□□ 0.34
Chd1P40201 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC17.15■□□□□ 0.34
Chd1P40201 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC17.15■□□□□ 0.34
Chd1P40201 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Chd1P40201 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC17.15■□□□□ 0.34
Chd1P40201 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC17.15■□□□□ 0.34
Chd1P40201 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd1P40201 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Chd1P40201 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd1P40201 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd1P40201 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd1P40201 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd1P40201 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd1P40201 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms