Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm6905-201ENSMUST00000205729 511 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm18165-201ENSMUST00000217426 928 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.66□□□□□ -0.86
Timp3P39876 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.65□□□□□ -0.86
Timp3P39876 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.65□□□□□ -0.86
Timp3P39876 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Gm14724-201ENSMUST00000118400 537 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.65□□□□□ -0.86
Timp3P39876 Gm9211-201ENSMUST00000182882 975 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Gm2965-201ENSMUST00000198365 343 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Gm8956-201ENSMUST00000203939 825 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Gm44100-201ENSMUST00000204329 436 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.65□□□□□ -0.86
Timp3P39876 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Gm807-202ENSMUST00000224929 408 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Timp3P39876 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.65□□□□□ -0.86
Timp3P39876 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Timp3P39876 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.65□□□□□ -0.86
Timp3P39876 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Timp3P39876 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Timp3P39876 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Timp3P39876 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Timp3P39876 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Timp3P39876 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Timp3P39876 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Timp3P39876 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Timp3P39876 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.65□□□□□ -0.87
Timp3P39876 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Timp3P39876 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.64□□□□□ -0.87
Timp3P39876 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Timp3P39876 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.64□□□□□ -0.87
Timp3P39876 Cog3-203ENSMUST00000227473 4197 ntBASIC9.64□□□□□ -0.87
Timp3P39876 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Timp3P39876 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.64□□□□□ -0.87
Timp3P39876 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Timp3P39876 Gm13408-201ENSMUST00000119822 798 ntBASIC9.64□□□□□ -0.87
Timp3P39876 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.64□□□□□ -0.87
Timp3P39876 Gm13935-201ENSMUST00000121859 798 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms