Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gm14724-201ENSMUST00000118400 537 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Gm8566-201ENSMUST00000120174 465 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.25□□□□□ -0.77
Upk2P38575 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Upk2P38575 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.25□□□□□ -0.77
Upk2P38575 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.25□□□□□ -0.77
Upk2P38575 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Upk2P38575 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Upk2P38575 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Upk2P38575 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.25□□□□□ -0.77
Upk2P38575 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.25□□□□□ -0.77
Upk2P38575 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.25□□□□□ -0.77
Upk2P38575 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.25□□□□□ -0.77
Upk2P38575 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Upk2P38575 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Upk2P38575 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.24□□□□□ -0.77
Upk2P38575 Gm11783-201ENSMUST00000119549 885 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Gm8815-201ENSMUST00000173809 620 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 Gm16505-201ENSMUST00000179981 232 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.24□□□□□ -0.77
Upk2P38575 Gm45186-201ENSMUST00000206874 478 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Gm18212-201ENSMUST00000211678 889 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.24□□□□□ -0.77
Upk2P38575 Gm18730-201ENSMUST00000218038 343 ntBASIC10.24□□□□□ -0.77
Upk2P38575 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Upk2P38575 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Upk2P38575 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.24□□□□□ -0.77
Upk2P38575 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Upk2P38575 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.24□□□□□ -0.77
Upk2P38575 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk2P38575 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk2P38575 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk2P38575 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Upk2P38575 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Upk2P38575 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms