Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm23045-201ENSMUST00000175041 96 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm18367-201ENSMUST00000176139 600 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm27438-201ENSMUST00000183480 110 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm45550-201ENSMUST00000209380 946 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm7940-201ENSMUST00000218195 769 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.07□□□□□ -0.48
Nfkb1P25799 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nfkb1P25799 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nfkb1P25799 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm22711-201ENSMUST00000116890 133 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm11836-201ENSMUST00000121022 441 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm24844-201ENSMUST00000158679 127 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm12407-201ENSMUST00000180219 324 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm4654-201ENSMUST00000183305 982 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm8365-201ENSMUST00000197334 648 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm2517-201ENSMUST00000215651 348 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nfkb1P25799 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.06□□□□□ -0.48
Nfkb1P25799 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nfkb1P25799 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm14441-201ENSMUST00000121960 540 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm8737-201ENSMUST00000122208 642 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm10731-201ENSMUST00000181171 448 ntBASIC12.05□□□□□ -0.48
Nfkb1P25799 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms