Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm43316-201ENSMUST00000197252 1295 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm35960-201ENSMUST00000202712 767 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hoxd8P23463 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm25509-201ENSMUST00000116985 106 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm25025-201ENSMUST00000175018 111 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm21778-201ENSMUST00000178779 471 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm28877-201ENSMUST00000191349 604 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm42816-201ENSMUST00000198433 325 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm5298-201ENSMUST00000201122 892 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm18561-201ENSMUST00000206027 804 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm44683-201ENSMUST00000209088 484 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm8679-201ENSMUST00000210651 1036 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm9139-201ENSMUST00000218817 700 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Hoxd8P23463 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.13□□□□□ -0.47
Hoxd8P23463 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxd8P23463 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms