Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pde6bP23440 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.85□□□□□ -0.35
Pde6bP23440 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Pde6bP23440 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.85□□□□□ -0.35
Pde6bP23440 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.85□□□□□ -0.35
Pde6bP23440 Gm23045-201ENSMUST00000175041 96 ntBASIC12.85□□□□□ -0.35
Pde6bP23440 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pde6bP23440 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.85□□□□□ -0.35
Pde6bP23440 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.85□□□□□ -0.35
Pde6bP23440 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.85□□□□□ -0.35
Pde6bP23440 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pde6bP23440 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Snora73b-201ENSMUST00000083419 205 ntBASIC12.85□□□□□ -0.35
Pde6bP23440 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.85□□□□□ -0.35
Pde6bP23440 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.85□□□□□ -0.35
Pde6bP23440 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pde6bP23440 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pde6bP23440 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pde6bP23440 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.84□□□□□ -0.35
Pde6bP23440 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.84□□□□□ -0.35
Pde6bP23440 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Gm23771-201ENSMUST00000178702 110 ntBASIC12.84□□□□□ -0.35
Pde6bP23440 Gm27910-201ENSMUST00000185004 107 ntBASIC12.84□□□□□ -0.35
Pde6bP23440 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.84□□□□□ -0.35
Pde6bP23440 Gm5714-201ENSMUST00000197343 566 ntBASIC12.84□□□□□ -0.35
Pde6bP23440 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.84□□□□□ -0.35
Pde6bP23440 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.84□□□□□ -0.35
Pde6bP23440 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.84□□□□□ -0.35
Pde6bP23440 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pde6bP23440 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pde6bP23440 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6bP23440 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6bP23440 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6bP23440 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6bP23440 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6bP23440 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pde6bP23440 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.83□□□□□ -0.36
Pde6bP23440 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms