Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Col1a1P11087 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col1a1P11087 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col1a1P11087 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col1a1P11087 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col1a1P11087 Gm25148-201ENSMUST00000104611 123 ntBASIC13.57□□□□□ -0.24
Col1a1P11087 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.57□□□□□ -0.24
Col1a1P11087 Gm17221-201ENSMUST00000163909 481 ntBASIC13.57□□□□□ -0.24
Col1a1P11087 Gm17073-201ENSMUST00000168069 556 ntBASIC13.57□□□□□ -0.24
Col1a1P11087 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col1a1P11087 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.57□□□□□ -0.24
Col1a1P11087 Id2-203ENSMUST00000222667 958 ntBASIC13.57□□□□□ -0.24
Col1a1P11087 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.57□□□□□ -0.24
Col1a1P11087 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col1a1P11087 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Col1a1P11087 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Col1a1P11087 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.57□□□□□ -0.24
Col1a1P11087 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col1a1P11087 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col1a1P11087 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.56□□□□□ -0.24
Col1a1P11087 Gm11942-201ENSMUST00000180255 345 ntBASIC13.56□□□□□ -0.24
Col1a1P11087 Gm38314-201ENSMUST00000195709 625 ntBASIC13.56□□□□□ -0.24
Col1a1P11087 Gm44814-201ENSMUST00000207018 434 ntBASIC13.56□□□□□ -0.24
Col1a1P11087 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.56□□□□□ -0.24
Col1a1P11087 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.56□□□□□ -0.24
Col1a1P11087 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.56□□□□□ -0.24
Col1a1P11087 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col1a1P11087 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Col1a1P11087 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.56□□□□□ -0.24
Col1a1P11087 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.56□□□□□ -0.24
Col1a1P11087 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.56□□□□□ -0.24
Col1a1P11087 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.56□□□□□ -0.24
Col1a1P11087 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col1a1P11087 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Col1a1P11087 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.55□□□□□ -0.24
Col1a1P11087 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.55□□□□□ -0.24
Col1a1P11087 Mir432-201ENSMUST00000157230 75 ntBASIC13.55□□□□□ -0.24
Col1a1P11087 Gm26368-201ENSMUST00000157826 118 ntBASIC13.55□□□□□ -0.24
Col1a1P11087 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Col1a1P11087 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.55□□□□□ -0.24
Col1a1P11087 Gm42599-201ENSMUST00000201308 469 ntBASIC13.55□□□□□ -0.24
Col1a1P11087 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.55□□□□□ -0.24
Col1a1P11087 Gm5449-201ENSMUST00000081132 357 ntBASIC13.55□□□□□ -0.24
Col1a1P11087 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col1a1P11087 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col1a1P11087 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col1a1P11087 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms