Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.23□□□□□ -0.77
PtcraP0C6B2 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PtcraP0C6B2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm11500-201ENSMUST00000118237 601 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm11439-201ENSMUST00000118598 409 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm25881-201ENSMUST00000157783 103 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm2383-201ENSMUST00000181461 807 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm43002-201ENSMUST00000200310 155 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm21811-201ENSMUST00000096485 930 ntBASIC10.22□□□□□ -0.77
PtcraP0C6B2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
PtcraP0C6B2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PtcraP0C6B2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.21□□□□□ -0.77
PtcraP0C6B2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Gm13263-201ENSMUST00000121271 838 ntBASIC10.21□□□□□ -0.77
PtcraP0C6B2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Gm10807-201ENSMUST00000177134 795 ntBASIC10.21□□□□□ -0.77
PtcraP0C6B2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.21□□□□□ -0.77
PtcraP0C6B2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.21□□□□□ -0.77
PtcraP0C6B2 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.21□□□□□ -0.77
PtcraP0C6B2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
PtcraP0C6B2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
PtcraP0C6B2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PtcraP0C6B2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
PtcraP0C6B2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
PtcraP0C6B2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms