Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.08□□□□□ -0.64
ApoeP08226 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ApoeP08226 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.07□□□□□ -0.64
ApoeP08226 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ApoeP08226 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.07□□□□□ -0.64
ApoeP08226 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.07□□□□□ -0.64
ApoeP08226 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.07□□□□□ -0.64
ApoeP08226 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.07□□□□□ -0.64
ApoeP08226 Gm6439-201ENSMUST00000199849 862 ntBASIC11.07□□□□□ -0.64
ApoeP08226 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.07□□□□□ -0.64
ApoeP08226 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.07□□□□□ -0.64
ApoeP08226 Gm18165-201ENSMUST00000217426 928 ntBASIC11.07□□□□□ -0.64
ApoeP08226 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ApoeP08226 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
ApoeP08226 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.07□□□□□ -0.64
ApoeP08226 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.07□□□□□ -0.64
ApoeP08226 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
ApoeP08226 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.06□□□□□ -0.64
ApoeP08226 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
ApoeP08226 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
ApoeP08226 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.06□□□□□ -0.64
ApoeP08226 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.06□□□□□ -0.64
ApoeP08226 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
ApoeP08226 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.06□□□□□ -0.64
ApoeP08226 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Gm42627-201ENSMUST00000197347 224 ntBASIC11.06□□□□□ -0.64
ApoeP08226 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Gm40466-201ENSMUST00000212174 422 ntBASIC11.06□□□□□ -0.64
ApoeP08226 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.06□□□□□ -0.64
ApoeP08226 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.06□□□□□ -0.64
ApoeP08226 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
ApoeP08226 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
ApoeP08226 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
ApoeP08226 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ApoeP08226 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms