Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col3a1P08121 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.83□□□□□ -0.2
Col3a1P08121 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.83□□□□□ -0.2
Col3a1P08121 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.83□□□□□ -0.2
Col3a1P08121 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Col3a1P08121 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.83□□□□□ -0.2
Col3a1P08121 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Col3a1P08121 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col3a1P08121 Gm14807-201ENSMUST00000116640 983 ntBASIC13.82□□□□□ -0.2
Col3a1P08121 Gm14270-201ENSMUST00000118388 846 ntBASIC13.82□□□□□ -0.2
Col3a1P08121 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col3a1P08121 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col3a1P08121 Gm19246-201ENSMUST00000173599 255 ntBASIC13.82□□□□□ -0.2
Col3a1P08121 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col3a1P08121 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col3a1P08121 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col3a1P08121 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col3a1P08121 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.82□□□□□ -0.2
Col3a1P08121 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.82□□□□□ -0.2
Col3a1P08121 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col3a1P08121 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.82□□□□□ -0.2
Col3a1P08121 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Col3a1P08121 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.82□□□□□ -0.2
Col3a1P08121 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.82□□□□□ -0.2
Col3a1P08121 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col3a1P08121 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.81□□□□□ -0.2
Col3a1P08121 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.81□□□□□ -0.2
Col3a1P08121 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Gm24248-201ENSMUST00000157321 322 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 Gm4862-201ENSMUST00000170405 438 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col3a1P08121 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col3a1P08121 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Gm9081-201ENSMUST00000182346 991 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Gm9369-201ENSMUST00000196009 733 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.81□□□□□ -0.2
Col3a1P08121 Gm18059-201ENSMUST00000208073 580 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col3a1P08121 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.81□□□□□ -0.2
Col3a1P08121 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col3a1P08121 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col3a1P08121 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col3a1P08121 Pck2-205ENSMUST00000226352 2784 ntBASIC13.81□□□□□ -0.2
Col3a1P08121 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col3a1P08121 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms