Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.11□□□□□ -0.47
PrnpP04925 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.11□□□□□ -0.47
PrnpP04925 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PrnpP04925 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PrnpP04925 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
PrnpP04925 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Gm25492-201ENSMUST00000157383 129 ntBASIC12.11□□□□□ -0.47
PrnpP04925 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.11□□□□□ -0.47
PrnpP04925 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.11□□□□□ -0.47
PrnpP04925 Gm4604-201ENSMUST00000025040 390 ntBASIC12.11□□□□□ -0.47
PrnpP04925 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PrnpP04925 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.11□□□□□ -0.47
PrnpP04925 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.11□□□□□ -0.47
PrnpP04925 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.11□□□□□ -0.47
PrnpP04925 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PrnpP04925 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.11□□□□□ -0.47
PrnpP04925 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.11□□□□□ -0.47
PrnpP04925 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PrnpP04925 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PrnpP04925 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.1□□□□□ -0.47
PrnpP04925 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Gm13351-201ENSMUST00000118087 414 ntBASIC12.1□□□□□ -0.47
PrnpP04925 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.1□□□□□ -0.47
PrnpP04925 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.1□□□□□ -0.47
PrnpP04925 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.1□□□□□ -0.47
PrnpP04925 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.1□□□□□ -0.47
PrnpP04925 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.1□□□□□ -0.47
PrnpP04925 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PrnpP04925 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PrnpP04925 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PrnpP04925 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.1□□□□□ -0.47
PrnpP04925 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.1□□□□□ -0.47
PrnpP04925 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.1□□□□□ -0.47
PrnpP04925 Gm16380-201ENSMUST00000077997 478 ntBASIC12.1□□□□□ -0.47
PrnpP04925 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.1□□□□□ -0.47
PrnpP04925 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
PrnpP04925 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.1□□□□□ -0.47
PrnpP04925 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.1□□□□□ -0.47
PrnpP04925 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
PrnpP04925 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PrnpP04925 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PrnpP04925 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PrnpP04925 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
PrnpP04925 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
PrnpP04925 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.09□□□□□ -0.47
PrnpP04925 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.09□□□□□ -0.47
PrnpP04925 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.09□□□□□ -0.47
PrnpP04925 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Gm11500-201ENSMUST00000118237 601 ntBASIC12.09□□□□□ -0.47
PrnpP04925 Gm11700-201ENSMUST00000119409 403 ntBASIC12.09□□□□□ -0.47
PrnpP04925 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PrnpP04925 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.09□□□□□ -0.47
PrnpP04925 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.09□□□□□ -0.47
PrnpP04925 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms