Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
H3f3cP02301 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.09□□□□□ -0.79
H3f3cP02301 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H3f3cP02301 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.09□□□□□ -0.79
H3f3cP02301 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
H3f3cP02301 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm11439-201ENSMUST00000118598 409 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
H3f3cP02301 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm15711-201ENSMUST00000118889 535 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm29199-201ENSMUST00000187766 775 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm19287-201ENSMUST00000203190 358 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
H3f3cP02301 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
H3f3cP02301 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
H3f3cP02301 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
H3f3cP02301 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
H3f3cP02301 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
H3f3cP02301 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
H3f3cP02301 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.08□□□□□ -0.8
H3f3cP02301 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
H3f3cP02301 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.07□□□□□ -0.8
H3f3cP02301 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
H3f3cP02301 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Gm14208-201ENSMUST00000119645 678 ntBASIC10.07□□□□□ -0.8
H3f3cP02301 Gm14441-201ENSMUST00000121960 540 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms