Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vti1aO89116 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.68□□□□□ -0.38
Vti1aO89116 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.68□□□□□ -0.38
Vti1aO89116 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.68□□□□□ -0.38
Vti1aO89116 Gm42790-201ENSMUST00000201268 969 ntBASIC12.68□□□□□ -0.38
Vti1aO89116 Gm7600-201ENSMUST00000209657 785 ntBASIC12.68□□□□□ -0.38
Vti1aO89116 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.68□□□□□ -0.38
Vti1aO89116 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vti1aO89116 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.68□□□□□ -0.38
Vti1aO89116 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.68□□□□□ -0.38
Vti1aO89116 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.68□□□□□ -0.38
Vti1aO89116 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vti1aO89116 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Vti1aO89116 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vti1aO89116 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Gm11246-201ENSMUST00000120880 345 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.67□□□□□ -0.38
Vti1aO89116 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Vti1aO89116 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.67□□□□□ -0.38
Vti1aO89116 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.67□□□□□ -0.38
Vti1aO89116 Gm9463-201ENSMUST00000206707 601 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 Gm2517-201ENSMUST00000215651 348 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vti1aO89116 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.67□□□□□ -0.38
Vti1aO89116 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.67□□□□□ -0.38
Vti1aO89116 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.67□□□□□ -0.38
Vti1aO89116 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Vti1aO89116 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vti1aO89116 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Vti1aO89116 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Vti1aO89116 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vti1aO89116 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.66□□□□□ -0.38
Vti1aO89116 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Gm14585-201ENSMUST00000120713 634 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Gm12164-201ENSMUST00000121695 551 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Gm7666-201ENSMUST00000146631 819 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vti1aO89116 Gm9358-201ENSMUST00000183067 927 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Gm28324-201ENSMUST00000187913 264 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.66□□□□□ -0.38
Vti1aO89116 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.66□□□□□ -0.38
Vti1aO89116 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.66□□□□□ -0.38
Vti1aO89116 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vti1aO89116 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.66□□□□□ -0.38
Vti1aO89116 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.66□□□□□ -0.38
Vti1aO89116 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Vti1aO89116 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vti1aO89116 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.65□□□□□ -0.38
Vti1aO89116 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms