Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CopeO89079 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.05□□□□□ -0.48
CopeO89079 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CopeO89079 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
CopeO89079 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CopeO89079 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CopeO89079 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CopeO89079 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CopeO89079 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Gm14644-201ENSMUST00000116671 647 ntBASIC12.04□□□□□ -0.48
CopeO89079 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.04□□□□□ -0.48
CopeO89079 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.04□□□□□ -0.48
CopeO89079 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Gm6013-201ENSMUST00000212264 699 ntBASIC12.04□□□□□ -0.48
CopeO89079 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.04□□□□□ -0.48
CopeO89079 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.04□□□□□ -0.48
CopeO89079 Morn2-202ENSMUST00000227729 656 ntBASIC12.04□□□□□ -0.48
CopeO89079 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CopeO89079 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CopeO89079 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CopeO89079 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CopeO89079 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.04□□□□□ -0.48
CopeO89079 Erich3-203ENSMUST00000189969 3460 ntBASIC12.04□□□□□ -0.48
CopeO89079 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CopeO89079 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CopeO89079 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CopeO89079 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.03□□□□□ -0.48
CopeO89079 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.03□□□□□ -0.48
CopeO89079 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.03□□□□□ -0.48
CopeO89079 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CopeO89079 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.03□□□□□ -0.48
CopeO89079 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.03□□□□□ -0.48
CopeO89079 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CopeO89079 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CopeO89079 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CopeO89079 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms