Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.35□□□□□ -0.11
Setdb1O88974 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Setdb1O88974 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Setdb1O88974 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Setdb1O88974 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Setdb1O88974 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.35□□□□□ -0.11
Setdb1O88974 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Setdb1O88974 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Setdb1O88974 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Setdb1O88974 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Setdb1O88974 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm24791-201ENSMUST00000104284 131 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Gm12453-201ENSMUST00000121981 331 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.34□□□□□ -0.11
Setdb1O88974 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Gm3726-201ENSMUST00000203110 785 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Gm43912-201ENSMUST00000204352 538 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Gm44506-201ENSMUST00000206278 965 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.34□□□□□ -0.11
Setdb1O88974 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.34□□□□□ -0.11
Setdb1O88974 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Setdb1O88974 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Setdb1O88974 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Setdb1O88974 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.33□□□□□ -0.11
Setdb1O88974 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Setdb1O88974 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Setdb1O88974 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.33□□□□□ -0.12
Setdb1O88974 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Gm12439-201ENSMUST00000117162 365 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Gm14441-201ENSMUST00000121960 540 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Gm25998-201ENSMUST00000175397 53 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Gm12407-201ENSMUST00000180219 324 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.33□□□□□ -0.12
Setdb1O88974 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.33□□□□□ -0.12
Setdb1O88974 Gm44647-201ENSMUST00000207402 428 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Setdb1O88974 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.33□□□□□ -0.12
Setdb1O88974 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Setdb1O88974 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Setdb1O88974 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Setdb1O88974 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Setdb1O88974 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Setdb1O88974 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Setdb1O88974 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Setdb1O88974 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.32□□□□□ -0.12
Setdb1O88974 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms