Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm2260-201ENSMUST00000184965 657 ntBASIC11.25□□□□□ -0.61
Hcn1O88704 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.25□□□□□ -0.61
Hcn1O88704 Gm18212-201ENSMUST00000211678 889 ntBASIC11.25□□□□□ -0.61
Hcn1O88704 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.25□□□□□ -0.61
Hcn1O88704 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Hcn1O88704 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.25□□□□□ -0.61
Hcn1O88704 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hcn1O88704 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.24□□□□□ -0.61
Hcn1O88704 Btrc-209ENSMUST00000224478 2194 ntBASIC11.24□□□□□ -0.61
Hcn1O88704 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.24□□□□□ -0.61
Hcn1O88704 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hcn1O88704 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.24□□□□□ -0.61
Hcn1O88704 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hcn1O88704 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Gm17812-201ENSMUST00000204935 318 ntBASIC11.24□□□□□ -0.61
Hcn1O88704 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.24□□□□□ -0.61
Hcn1O88704 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.24□□□□□ -0.61
Hcn1O88704 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Hcn1O88704 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hcn1O88704 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hcn1O88704 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hcn1O88704 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hcn1O88704 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.23□□□□□ -0.61
Hcn1O88704 Rprl1-201ENSMUST00000158050 327 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.23□□□□□ -0.61
Hcn1O88704 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hcn1O88704 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hcn1O88704 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hcn1O88704 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hcn1O88704 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms