Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm17944-201ENSMUST00000186351 643 ntBASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scaf11E9PZM7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm15746-201ENSMUST00000120684 1027 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm7572-201ENSMUST00000182616 766 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm27440-201ENSMUST00000184785 107 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm30055-201ENSMUST00000203175 803 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm5178-201ENSMUST00000219380 898 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 AC122035.1-201ENSMUST00000227576 1016 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm6478-201ENSMUST00000099450 742 ntBASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scaf11E9PZM7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm13281-201ENSMUST00000120871 567 ntBASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Defa-ps17-201ENSMUST00000121849 171 ntBASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm26174-201ENSMUST00000158415 219 ntBASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm27826-201ENSMUST00000175282 255 ntBASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm7765-201ENSMUST00000182585 974 ntBASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm27390-201ENSMUST00000184516 176 ntBASIC16.1■□□□□ 0.17
Scaf11E9PZM7 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scaf11E9PZM7 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC16.09■□□□□ 0.17
Scaf11E9PZM7 AC166361.2-201ENSMUST00000219269 1415 ntBASIC16.09■□□□□ 0.17
Scaf11E9PZM7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC16.09■□□□□ 0.17
Scaf11E9PZM7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.09■□□□□ 0.17
Scaf11E9PZM7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC16.09■□□□□ 0.17
Scaf11E9PZM7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Scaf11E9PZM7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scaf11E9PZM7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms