Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Nudt13-207ENSMUST00000224311 1574 ntBASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hfm1D3Z4R1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Gm24943-201ENSMUST00000158329 433 ntBASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 AC174797.2-201ENSMUST00000225835 165 ntBASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hfm1D3Z4R1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Gm44831-201ENSMUST00000208469 2989 ntBASIC16.21■□□□□ 0.18
Hfm1D3Z4R1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Gm25872-201ENSMUST00000177784 100 ntBASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Gm27440-201ENSMUST00000184785 107 ntBASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Gm45428-201ENSMUST00000209619 1789 ntBASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Gm19692-201ENSMUST00000203856 2084 ntBASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC16.2■□□□□ 0.18
Hfm1D3Z4R1 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Mir6953-201ENSMUST00000184745 68 ntBASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Gm10580-201ENSMUST00000097985 396 ntBASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Gm10582-201ENSMUST00000097987 396 ntBASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Gm10583-201ENSMUST00000097988 396 ntBASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hfm1D3Z4R1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms