Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm23745-201ENSMUST00000104230 125 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm35960-201ENSMUST00000202712 767 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 BC080696-201ENSMUST00000202858 1218 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm9204-201ENSMUST00000212641 947 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm13094-201ENSMUST00000117930 409 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Gm18733-202ENSMUST00000174447 401 ntBASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col4a6B1AVK5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col4a6B1AVK5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col4a6B1AVK5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Gm5529-201ENSMUST00000165691 891 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Gm18014-201ENSMUST00000183369 817 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col4a6B1AVK5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.82□□□□□ -0.52
Col4a6B1AVK5 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms