Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn3aA2ASI5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm3828-201ENSMUST00000121817 257 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm17192-201ENSMUST00000169031 511 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm43912-201ENSMUST00000204352 538 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm16380-201ENSMUST00000077997 478 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Paupar-201ENSMUST00000194826 3482 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm16397-201ENSMUST00000122201 494 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm26976-201ENSMUST00000182929 908 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Mt1-202ENSMUST00000211807 1085 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Scn3aA2ASI5 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.93□□□□□ -0.34
Scn3aA2ASI5 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Btrc-209ENSMUST00000224478 2194 ntBASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn3aA2ASI5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn3aA2ASI5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms