Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm11956-201ENSMUST00000119525 512 ntBASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm28324-201ENSMUST00000187913 264 ntBASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Snora73b-201ENSMUST00000083419 205 ntBASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cfap99A0A140LIX9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cfap99A0A140LIX9 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm12036-201ENSMUST00000120008 530 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm2517-201ENSMUST00000215651 348 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm9797-202ENSMUST00000218003 294 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm5705-201ENSMUST00000066241 711 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cfap99A0A140LIX9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Gm13263-201ENSMUST00000121271 838 ntBASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.01□□□□□ -0.17
Cfap99A0A140LIX9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms