Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm5706-201ENSMUST00000181525 993 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm44651-201ENSMUST00000207343 372 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sec61a2Q9JLR1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.58□□□□□ -0.71
Sec61a2Q9JLR1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Gm13665-201ENSMUST00000120830 528 ntBASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Gm45186-201ENSMUST00000206874 478 ntBASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sec61a2Q9JLR1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sec61a2Q9JLR1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms