Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Smco4Q9JIS3 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm25144-201ENSMUST00000179561 110 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm25352-201ENSMUST00000179815 110 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm37597-201ENSMUST00000191853 382 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm9136-201ENSMUST00000193368 454 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco4Q9JIS3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.32□□□□□ -0.92
Smco4Q9JIS3 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smco4Q9JIS3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms