Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
Trim39Q9ESN2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim39Q9ESN2 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
Trim39Q9ESN2 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trim39Q9ESN2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim39Q9ESN2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim39Q9ESN2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim39Q9ESN2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Trim39Q9ESN2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm27501-201ENSMUST00000183599 107 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm45072-201ENSMUST00000208673 929 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim39Q9ESN2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Gm11531-201ENSMUST00000117614 555 ntBASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Gm42919-201ENSMUST00000197753 1284 ntBASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Gm8227-201ENSMUST00000223306 571 ntBASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim39Q9ESN2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms