Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Mir744-201ENSMUST00000103261 100 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm24279-201ENSMUST00000104236 131 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm14234-201ENSMUST00000119539 845 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm17221-201ENSMUST00000163909 481 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm17073-201ENSMUST00000168069 556 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm18041-201ENSMUST00000218210 618 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx2-4Q9EQM3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nkx2-4Q9EQM3 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm23255-201ENSMUST00000102244 110 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm15549-201ENSMUST00000121595 622 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm25492-201ENSMUST00000157383 129 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm24954-201ENSMUST00000178831 110 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm43547-201ENSMUST00000197729 328 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Mir326-201ENSMUST00000083637 95 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx2-4Q9EQM3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gm15197-201ENSMUST00000120526 478 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gm15196-201ENSMUST00000121406 482 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gm15329-201ENSMUST00000121408 155 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms