Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
U2af1Q9D883 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
U2af1Q9D883 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
U2af1Q9D883 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Gm43242-201ENSMUST00000199507 1776 ntBASIC15.39■□□□□ 0.05
U2af1Q9D883 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
U2af1Q9D883 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
U2af1Q9D883 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Gm44506-201ENSMUST00000206278 965 ntBASIC15.39■□□□□ 0.05
U2af1Q9D883 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
U2af1Q9D883 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.39■□□□□ 0.05
U2af1Q9D883 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.39■□□□□ 0.05
U2af1Q9D883 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC15.39■□□□□ 0.05
U2af1Q9D883 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
U2af1Q9D883 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.39■□□□□ 0.05
U2af1Q9D883 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
U2af1Q9D883 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.38■□□□□ 0.05
U2af1Q9D883 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm26047-201ENSMUST00000157308 113 ntBASIC15.38■□□□□ 0.05
U2af1Q9D883 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm26047-202ENSMUST00000198840 115 ntBASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm17831-201ENSMUST00000205579 900 ntBASIC15.38■□□□□ 0.05
U2af1Q9D883 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.38■□□□□ 0.05
U2af1Q9D883 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
U2af1Q9D883 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
U2af1Q9D883 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
U2af1Q9D883 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
U2af1Q9D883 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC15.37■□□□□ 0.05
U2af1Q9D883 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm12616-201ENSMUST00000118594 382 ntBASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm11836-201ENSMUST00000121022 441 ntBASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm7150-201ENSMUST00000122032 981 ntBASIC15.37■□□□□ 0.05
U2af1Q9D883 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm10807-201ENSMUST00000177134 795 ntBASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm12624-201ENSMUST00000177615 382 ntBASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm12621-201ENSMUST00000177760 382 ntBASIC15.37■□□□□ 0.05
U2af1Q9D883 Gm12615-201ENSMUST00000177970 382 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms