Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.9□□□□□ -0.34
Cfap53Q9D439 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.9□□□□□ -0.34
Cfap53Q9D439 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cfap53Q9D439 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.9□□□□□ -0.35
Cfap53Q9D439 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.89□□□□□ -0.35
Cfap53Q9D439 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gm11700-201ENSMUST00000119409 403 ntBASIC12.89□□□□□ -0.35
Cfap53Q9D439 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.89□□□□□ -0.35
Cfap53Q9D439 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gm28071-201ENSMUST00000190355 478 ntBASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cfap53Q9D439 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Mir877-201ENSMUST00000104738 85 ntBASIC12.88□□□□□ -0.35
Cfap53Q9D439 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Gm8343-201ENSMUST00000182705 994 ntBASIC12.88□□□□□ -0.35
Cfap53Q9D439 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Mir7677-201ENSMUST00000184226 67 ntBASIC12.88□□□□□ -0.35
Cfap53Q9D439 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Rps4l-202ENSMUST00000204242 789 ntBASIC12.88□□□□□ -0.35
Cfap53Q9D439 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.88□□□□□ -0.35
Cfap53Q9D439 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cfap53Q9D439 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms