Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm11700-201ENSMUST00000119409 403 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm4986-201ENSMUST00000119731 549 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm14441-201ENSMUST00000121960 540 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm25261-201ENSMUST00000157416 134 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm43002-201ENSMUST00000200310 155 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chaf1bQ9D0N7 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Chaf1bQ9D0N7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chaf1bQ9D0N7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms