Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm11989-201ENSMUST00000117240 672 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm11362-201ENSMUST00000118838 850 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.23□□□□□ -0.61
Shmt2Q9CZN7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shmt2Q9CZN7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Gm25700-201ENSMUST00000177693 110 ntBASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shmt2Q9CZN7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.21□□□□□ -0.62
Shmt2Q9CZN7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms